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Jupyter notebook
(programming.dev)
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To answer the first question, do whatever works for you, but I’d look at alternatives like Notable. It offers cross platform apps with sync using any desktop file sync service like OneDrive or iCloud.
I personally don’t see a point to using a Jupyter notebook for taking notes. You can create markdown files in Jupyter labs if I’m not mistaken, which is what I’d probably do, but I wouldn’t because I use Notable for that.