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Onion repositories are package repositories hosted on tor hidden services. The connection goes through six hops and is end to end encrypted. In addition to further legitimizing the tor network with normal everyday usage it has the benefit of hiding what packages have been installed on a system.
Here are some notes about them if you want to read more.
https://blog.torproject.org/debian-and-tor-services-available-onion-services/
https://www.whonix.org/wiki/Onionizing_Repositories
That's pretty neat. I might start doing that, just for kicks.
That is very interesting, thanks!