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what does this mean for Flatpak?
(lemm.ee)
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Linux is a family of open source Unix-like operating systems based on the Linux kernel, an operating system kernel first released on September 17, 1991 by Linus Torvalds. Linux is typically packaged in a Linux distribution (or distro for short).
Distributions include the Linux kernel and supporting system software and libraries, many of which are provided by the GNU Project. Many Linux distributions use the word "Linux" in their name, but the Free Software Foundation uses the name GNU/Linux to emphasize the importance of GNU software, causing some controversy.
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The first one allows Flatseal to edit the permissions of Flatpak apps including itself.
System folder access allows a app to read the filesystem. (But not system internals)
System settings access allows the app to change settings
So the only concerning one is Xournal. However, I happen to know that it doesn't support XDG portals which is how apps ask for permissions to files so it needs full file access. As for the system settings I have no idea.