I'm inclined to give Linux more benefit of the doubt than, say, Windows. That's because of the motives behind it.
Microsoft have a very long history of making design choices in their software that users don't like, and quite often that's because it suits their interests more than their customers. They are a commercial business that exists to benefit itself, after all. Same with Apple. Money spoils everything pure, after all. You mention privacy, but that's just one more example of someone wanting to benefit financially from you - it's just in a less transparent and more open-ended way than paying them some cash.
Linux, because that monetary incentive is far less, is usually designed simply "to be better". The developers are often primary users of the software. Sure - sometimes developers make choices that confuses users, but that over-arching driving business interest just isn't there.