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so one thing that has been driving me nuts is that windows is doing something to my external TB drive to where Ubuntu thinks its corrupt. (I have dual-boot) after googling it, windows sets the drive flag as a "dirty" NTFS system, and Linux no longer reads it afterwards. not sure if there's any solution to fix that, but I'll give these a shot.
You can use ntfsfix on the drive to do a check and remove dirty bit. This isn’t a full check though, and could mask or hide actual issues with the drive if it’s failing.
There’s also chkntfs which is more robust but I’m not sure if that’s open source and I’m not familiar with it.
Using ntfsfix is a good quick fix in my experience, but at the end of the day, NTFS is a Microsoft exclusive format and shared disks should be mounted in a format that both OSes can use, like exFAT, or Btrfs with the WinBtrfs driver (the latter I’m not familiar with, I’ve always used exFAT for shared disks, but I don’t use Windows anymore).
Did you try to disable "Fast Startup" ?
By default, Windows does not do a real shutdown anymore. It closes the user session and hibernates, to speed up the following start up. As a consequence, the Windows partition (and EFI partition ?) are not properly unmounted.
If you have Windows, it might be worth getting it to run Scandisk - or whatever the current equivalent is - on that drive.
That would at least give it less excuse to set problematic bits. In theory there'd be no harm doing this. In practice, well, make sure you have other copies of whatever is on that drive on the off-chance Windows constantly setting that bit is a sign of an underlying problem that Scandisk would make worse (or Windows/the disk decides to mangle files for some other reason.)